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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015845003.1_cds_XP_016509172.1_22126
CDS Infomation

[gene=LOC107826675] [db_xref=GeneID:107826675] [protein=E3 ubiquitin-protein ligase SIS3-like] [protein_id=XP_016509172.1] [location=complement(join(2712..3107,3881..3994,4119..4238,5808..5873,6270..6362,6442..6580,6977..7050,7149..7215,7366..7404,7514..7542))] [gbkey=CDS]
Sequence

ATGGCGATGAGAGGCGTTGATTTTAAATGGTACGATGGGTTCTTCTTGTCAATGCTAGCT
ACCAGTATAATTATTGTGGCTATCAACTGGAAGCGCTATCATCTTTGTATATACCCATTG
CACATCTGGATCGTGGTTGACTACACAACAGTGTTTGTGTTTCGACTCTTGATGTTTGTG
GATAATGGCCTTGCTGCTGGAATGGGATTGGATTTTGGTTGGCAGCAAAGATATGGTCGT
TTCTGTGGAAGAATAGCTGTTCTTTCTATTCTTGCCCTGCTTCTCTATCCCTTTCTTTGG
GCTTGGACCATCATTGGGACTTTATGGTTCACTAGTGCAAGAAACTGCCTTCCAGAAGAA
GGCCAAAAGTGGGGTTTCCTAATTTGGTTGCTATTCAGCTACTGTGGACTCCTGTGCATA
GCTTGCATATCGACAGGGAAGTGGTTAGCTAGAAGACAAGCCCATTTATTACGCGCACAA
CAAGGGATTCCTATCTCCGAATTTGGGGTGTTAGTTGACATGATCAGAGTGCCAGATTGG
GCATTCGAAGCTGCTGGCCAGGAGATGAGGGGGATGGGCCAAGATGCTGCTTCATACCAT
CCAGGACTTTATTTGAGCCAAGCTCAGAGAGAAGCAGTGGAGGCACTCATTCAAGAACTT
CCAATGTTCAGGATGAAGGCTGTTCCAACTGACTGCAGTGAGTGCCCAATCTGTTTGGAA
GAGTTTCATGTGGGAAATGAGGTTCGTGGTCTGCCTTGTGCTCACAACTTCCATGTTGCA
TGCATTGATGAATGGCTTCGCCTAAACGTGAAATGCCCTAGATGCCGTAGTTCTGTTTTT
CCGAATCTTGATCTCAGTGCTTTGTCAAATATCCGTGCTGATTCAGAAAATTCAGCAACC
AACTTTGTGACAGCAGCCCGGTATGTGAGATCCCAACCTTCTAGCCAGAGCTATCTGCTG
AGGTTGCAAGGTTTTCTTCGCCCTGTGCGCACAGAGGATGCTGGCTCAAGTAGTGAGGTA
AATGCAGCTGCTGCTCAAACAAGAGTTGAGAACGGAGCCCTAGCATCAGGACCTGACAGT
CACGGAAATGTAGAGCGTGTGGAAGTACTTGTGGAACATTCTCCAAGACAGCTGTAA

Peptide Sequence

PEP ID

XP_016509172.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Nicotiana tabacum]
Sequence

MAMRGVDFKWYDGFFLSMLATSIIIVAINWKRYHLCIYPLHIWIVVDYTTVFVFRLLMFV
DNGLAAGMGLDFGWQQRYGRFCGRIAVLSILALLLYPFLWAWTIIGTLWFTSARNCLPEE
GQKWGFLIWLLFSYCGLLCIACISTGKWLARRQAHLLRAQQGIPISEFGVLVDMIRVPDW
AFEAAGQEMRGMGQDAASYHPGLYLSQAQREAVEALIQELPMFRMKAVPTDCSECPICLE
EFHVGNEVRGLPCAHNFHVACIDEWLRLNVKCPRCRSSVFPNLDLSALSNIRADSENSAT
NFVTAARYVRSQPSSQSYLLRLQGFLRPVRTEDAGSSSEVNAAAAQTRVENGALASGPDS
HGNVERVEVLVEHSPRQL

Transcript Sequence

Gene sequence data has not been registered.